Miyakogusa Predicted Gene

Lj0g3v0096099.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KDK4_SOYBN 1019 89.9 94.7 (tr|I1KDK4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G78770.1 881 80.4 89.4 | Symbols: APC6 | anaphase promoting complex 6 | chr1:29617421-29621273 FORWARD LENGTH=543
Medicago Medtr8g058380.1 953 84.5 91.9 | anaphase promoting complex protein | HC | chr8:20111465-20101459 | 20130731
Soybean Glyma06g32850.1 1019 89.9 94.7  
LJGI gnl|LJGI|TC62687 1594 99.6 99.6 similar to UniRef100_A7P213 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (50%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0096099.1 length: 548 aa.
IPR001440 Tetratricopeptide TPR-1
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 6.9e-06 346-378
489-520
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1e-39 35-172
244-521
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 32.234 312-520
IPR013105 Tetratricopeptide TPR2
HMMPfam PF07719 TPR_2 0.004 133-162
312-342
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 0.003 72-105
131-164
244-277
312-345
346-379
414-447
453-486
487-520
ProfileScan PS50005 TPR 10.532 131-164
244-277
312-345
346-379
414-447
453-486
487-520
no_ID  
HMMPanther PTHR12558 CELL 1.5e-212 1-538
HMMPanther PTHR12558:SF9 CELL 1.5e-212 1-538
HMMPfam PF12895 Apc3 3.7e-17 19-97
HMMPfam PF13414 TPR_11 2.9e-11 415-483
superfamily SSF48452 TPR-like 1e-30 8-536
Wolf-PSORT
Lj0g3v0096099.1	cyto 6, chlo 3, nucl 3, cyto_E.R. 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0096099.1