Miyakogusa Predicted Gene

Lj0g3v0095649.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SB34_LOTJA 747 99.7 99.7 (tr|I3SB34) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G43860.1 493 63.9 79.8 | Symbols: | sequence-specific DNA binding transcription factors | chr1:16622244-16624385 REVERSE LENGTH=370
Medicago Medtr6g085170.1 660 87.5 94.4 | shwachman-bodian-diamond syndrome protein, putative | HC | chr6:32124321-32129905 | 20130731
Soybean Glyma14g27330.1 670 89.4 94.7  
LJGI gnl|LJGI|TC72801 1651 94.6 94.6 similar to UniRef100_A7NSL8 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (76%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0095649.1 length: 359 aa.
IPR002140 Ribosome maturation protein SBDS
method AccNumber shortName E-value location
HMMPanther PTHR10927 RIBOSOME 1.9e-113 2-357
HMMTigr TIGR00291 RNA_SBDS: 1.6e-49 13-232
IPR007087 Zinc finger, C2H2
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 300-322
IPR018023 Ribosome maturation protein SBDS, conserved site
PatternScan PS01267 UPF0023 NA 46-65
IPR018978 Ribosome maturation protein SBDS, C-terminal
Biological Process GO:0042254 ribosome biogenesis    
HMMPfam PF09377 SBDS_C 9.5e-32 109-228
IPR019783 Ribosome maturation protein SBDS, N-terminal
HMMPfam PF01172 SBDS 3.7e-31 15-103
superfamily SSF89895 FYSH 1.4e-29 12-96
no_ID  
Gene3D G3DSA:3.30.1250.10 no description 1.8e-34 17-96
superfamily SSF109728 Hypothetical 1.1e-24 91-165
superfamily SSF57667 C2H2 2.3e-07 283-349
Wolf-PSORT
Lj0g3v0095649.1	chlo 9, mito 2.5, nucl 2, cyto_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0095649.1