Miyakogusa Predicted Gene

Lj0g3v0095179.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KX65_SOYBN 425 64.8 75.8 (tr|K7KX65) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G21705.1 313 49.1 63.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:11533257-11534817 REVERSE LENGTH=492
Medicago Medtr8g059115.1 353 65.9 77.0 | PPR containing plant-like protein | HC | chr8:20661178-20662671 | 20130731
Soybean Glyma15g07950.1 352 53.8 69.5  
LJGI gnl|LJGI|TC79149 1455 100.0 100.0 weakly similar to UniRef100_A7R2K2 Cluster: Chromosome chr10 scaffold_433, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_433, whole genome shotgun sequence - Vitis vinifera (Grape), partial (51%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0095179.1 length: 364 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.019 144-169
176-204
209-238
317-340
HMMTigr TIGR00756 PPR: 0.00091 142-171
176-208
317-349
ProfileScan PS51375 PPR 7.300 69-103
138-172
207-241
176-206
243-273
278-308
313-348
no_ID  
Coil coil coiled-coil NA 217-238
HMMPanther PTHR24015 FAMILY 5.4e-121 19-345
HMMPanther PTHR24015:SF172UNKNOWN PROTEIN 5.4e-121 19-345
Seg seg seg NA 259-271
Wolf-PSORT
Lj0g3v0095179.1	chlo 8, mito 5.5, cyto_mito 3.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0095179.1