Miyakogusa Predicted Gene

Lj0g3v0094889.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SDH6_LOTJA 295 98.6 98.6 (tr|I3SDH6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G17670.2 137 53.6 74.4 | Symbols: | tetratricopeptide repeat (TPR)-containing protein | chr3:6040857-6042475 FORWARD LENGTH=244
Medicago Medtr3g015440.1 220 75.0 81.1 | TPR domain protein | HC | chr3:4470482-4466198 | 20130731
Soybean Glyma05g33500.1 224 79.9 86.1  
LJGI gnl|LJGI|TC72903 886 100.0 100.0 similar to UniRef100_A7QEJ1 Cluster: Chromosome chr17 scaffold_85, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_85, whole genome shotgun sequence - Vitis vinifera (Grape), partial (81%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0094889.1 length: 148 aa.
IPR001440 Tetratricopeptide TPR-1
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 2.2e-05 93-124
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3.8e-20 19-128
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 15.998 22-125
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 0.00043 22-55
58-91
92-125
ProfileScan PS50005 TPR 10.355 58-91
92-125
no_ID  
HMMPanther PTHR22904 TPR 1.3e-16 13-147
HMMPfam PF13414 TPR_11 3.4e-08 21-89
superfamily SSF48452 TPR-like 3.5e-19 13-143
Wolf-PSORT
Lj0g3v0094889.1	mito 7, nucl 3, plas 3, nucl_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0094889.1