Miyakogusa Predicted Gene

Lj0g3v0094869.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B7FI90_MEDTR 224 74.7 77.8 (tr|B7FI90) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1
TAIR_pep AT5G11590.1 181 56.8 62.5 | Symbols: TINY2 | Integrase-type DNA-binding superfamily protein | chr5:3727789-3728499 REVERSE LENGTH=236
Medicago Medtr3g110205.1 224 74.7 77.8 | AP2 domain class transcription factor | HC | chr3:51237707-51238569 | 20130731
Soybean Glyma06g08990.1 194 67.7 74.4  
LJGI gnl|LJGI|TC76056 1223 99.7 99.7 similar to UniRef100_A9PL75 Cluster: TINY-like protein; n=1; Populus trichocarpa|Rep: TINY-like protein - Populus trichocarpa (Western balsam poplar) (Populus balsamiferasubsp. trichocarpa), partial (49%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0094869.1 length: 207 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 6.1e-10 47-58
69-85
Gene3D G3DSA:3.30.730.10 no description 2.4e-30 46-104
HMMPfam PF00847 AP2 1.7e-14 46-95
HMMSmart SM00380 DNA-binding 1.1e-34 46-109
ProfileScan PS51032 AP2_ERF 22.669 46-103
IPR016177 DNA-binding, integrase-type
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 4e-22 45-106
no_ID  
HMMPanther PTHR31985 FAMILY 2.2e-75 6-204
Seg seg seg NA 2-43
137-151
Wolf-PSORT
Lj0g3v0094869.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0094869.1