Miyakogusa Predicted Gene

Lj0g3v0093479.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K701_SOYBN 1222 82.8 87.9 (tr|K7K701) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G22730.1 849 67.6 80.8 | Symbols: | MA3 domain-containing protein | chr1:8046511-8048769 FORWARD LENGTH=693
Medicago Medtr6g034560.1 1169 80.6 86.7 | MA3 domain protein | HC | chr6:14160372-14163558 | 20130731
Soybean Glyma02g08450.1 1224 83.5 88.6  
LJGI gnl|LJGI|AU088784 436 94.4 94.4 similar to UniRef100_A7QRM7 Cluster: Chromosome undetermined scaffold_151, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_151, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0093479.1 length: 720 aa.
IPR003891 Initiation factor eIF-4 gamma, MA3
method AccNumber shortName E-value location
HMMPfam PF02847 MA3 1.5e-29 128-239
293-402
428-537
596-704
HMMSmart SM00544 Domain 2.4e-27 128-239
292-403
427-538
595-704
ProfileScan PS51366 MI 23.988 127-248
291-412
426-547
594-713
IPR016021 MIF4-like, type 1/2/3
Biological Process GO:0016070 RNA metabolic process    
Gene3D G3DSA:1.25.40.180 no description 1e-17 124-336
425-637
643-712
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 1.6e-34 120-283
419-584
590-714
287-413
no_ID  
HMMPanther PTHR12626 PROGRAMMED 3.2e-227 75-713
HMMPanther PTHR12626:SF0 SUBFAMILY 3.2e-227 75-713
Seg seg seg NA 35-54
71-90
Wolf-PSORT
Lj0g3v0093479.1	chlo 4, nucl 3.5, plas 3, cysk_nucl 2.5, cyto 1, vacu 1, E.R. 1, E.R._vacu 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0093479.1