Miyakogusa Predicted Gene

Lj0g3v0092809.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M5XDQ3_PRUPE 591 63.2 76.5 (tr|M5XDQ3) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004024mg PE=4 SV=1
TAIR_pep AT3G62890.1 327 40.3 58.6 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:23246168-23247973 FORWARD LENGTH=573
Medicago Medtr3g466010.1 656 70.8 81.4 | PPR containing plant-like protein | HC | chr3:27120018-27122473 | 20130731
Soybean Glyma18g06290.1 509 61.6 70.8  
LJGI gnl|LJGI|BW597112 654 99.4 99.4 weakly similar to UniRef100_A7QJF8 Cluster: Chromosome chr8 scaffold_106, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_106, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0092809.1 length: 461 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.019 137-167
210-234
239-268
273-300
310-334
HMMPfam PF13041 PPR_2 2.9e-07 104-135
HMMTigr TIGR00756 PPR: 7.2e-06 106-137
137-171
239-270
ProfileScan PS51375 PPR 5.689 1-25
135-169
104-134
69-100
32-68
236-270
205-235
307-337
271-306
339-369
373-403
no_ID  
HMMPanther PTHR24015 FAMILY 3.5e-177 1-452
HMMPanther PTHR24015:SF61 PGR3 3.5e-177 1-452
Seg seg seg NA 172-187
Wolf-PSORT
Lj0g3v0092809.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0092809.1 Not targeted -35.167 -2.105 -11.256 42.07% -21.806