Miyakogusa Predicted Gene

Lj0g3v0092629.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SKI2_LOTJA 222 66.3 66.3 (tr|I3SKI2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G23860.2 162 51.6 56.2 | Symbols: SRZ-21, SRZ21, RSZ21, At-RSZ21 | RS-containing zinc finger protein 21 | chr1:8428091-8429164 REVERSE LENGTH=187
Medicago Medtr8g058530.1 58.9 46.1 60.5 | pre-mRNA-splicing factor SF2-like protein | HC | chr8:20148291-20144393 | 20130731
Soybean Glyma18g18860.1 177 57.8 60.6  
LJGI gnl|LJGI|TC57214 1088 100.0 100.0 similar to UniRef100_O23645 Cluster: RSZp21 protein; n=1; Arabidopsis thaliana|Rep: RSZp21 protein - Arabidopsis thaliana (Mouse-ear cress), partial (72%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0092629.1 length: 181 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 3e-14 4-61
HMMSmart SM00360 RNA 1.2e-15 3-69
ProfileScan PS50102 RRM 15.409 2-73
IPR001878 Zinc finger, CCHC-type
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.60.10 no description 8.7e-07 88-109
HMMPfam PF00098 zf-CCHC 8.7e-08 91-107
HMMSmart SM00343 zinc 1.9e-05 91-107
ProfileScan PS50158 ZF_CCHC 11.037 91-107
superfamily SSF57756 Retrovirus 8.2e-06 78-107
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 1.5e-19 2-78
no_ID  
HMMPanther PTHR10548 SPLICING 2.3e-59 1-161
Seg seg seg NA 74-87
106-152
superfamily SSF54928 RNA-binding 2.5e-17 3-86
Wolf-PSORT
Lj0g3v0092629.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0092629.1