Miyakogusa Predicted Gene

Lj0g3v0092449.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LS12_SOYBN 295 73.7 79.4 (tr|I1LS12) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G20740.1 216 52.8 65.3 | Symbols: | Tetraspanin family protein | chr2:8935788-8937292 FORWARD LENGTH=221
Medicago Medtr1g069185.1 112 35.4 54.4 | tetraspanin family protein | HC | chr1:29778816-29783451 | 20130731
Soybean Glyma12g12530.1 294 73.7 79.4  
LJGI gnl|LJGI|TC59435 1138 99.2 99.2 similar to UniRef100_A7PWY4 Cluster: Chromosome chr12 scaffold_36, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_36, whole genome shotgun sequence - Vitis vinifera (Grape), partial (67%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0092449.1 length: 197 aa.
IPR000301 Tetraspanin
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
FPrintScan PR00259 TMFOUR 7.8e-05 3-26
74-102
IPR018499 Tetraspanin/Peripherin
Cellular Component GO:0016021 integral to membrane    
HMMPfam PF00335 Tetraspannin 1.8e-12 7-106
no_ID  
HMMPanther PTHR19282 TETRASPANIN 1e-35 1-174
HMMPanther PTHR19282:SF69 SUBFAMILY 1e-35 1-174
Seg seg seg NA 136-157
162-171
Putative transmembrane regions
  From To
TM segments
SOSUI		 10 32
49 71
80 102
135 157
Wolf-PSORT
Lj0g3v0092449.1	plas 5, E.R. 4, chlo 2, golg 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0092449.1