Miyakogusa Predicted Gene

Lj0g3v0091679.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1JLY3_SOYBN 1027 84.4 88.8 (tr|I1JLY3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G54010.1 822 70.9 82.2 | Symbols: PAS1, DEI1 | FKBP-type peptidyl-prolyl cis-trans isomerase family protein | chr3:20001042-20005063 FORWARD LENGTH=635
Medicago Medtr4g055500.1 998 82.4 87.5 | peptidyl-prolyl cis-trans isomerase, FKBP-type protein | HC | chr4:20216928-20229058 | 20130731
Soybean Glyma03g16440.1 1027 84.4 88.8  
LJGI gnl|LJGI|TC59559 1039 99.8 99.8 similar to UniRef100_A7PNW9 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0091679.1 length: 589 aa.
IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain
method AccNumber shortName E-value location
Biological Process GO:0006457 protein folding    
HMMPfam PF00254 FKBP_C 3.1e-13 14-110
144-223
259-347
ProfileScan PS50059 FKBP_PPIASE 17.241 17-113
141-227
258-350
IPR001440 Tetratricopeptide TPR-1
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 2.2e-05 451-480
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.3e-27 365-510
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 15.964 367-400
416-483
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 0.015 367-400
416-449
450-483
ProfileScan PS50005 TPR 9.440 367-400
416-449
450-483
IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type
HMMPanther PTHR10516 PEPTIDYL-PROLYL 3.9e-287 1-555
no_ID  
Coil coil coiled-coil NA 484-508
Gene3D G3DSA:3.10.50.40 no description 2.5e-21 2-112
117-230
231-355
HMMPanther PTHR10516:SF70 PAS1 3.9e-287 1-555
HMMPfam PF13414 TPR_11 1.3e-12 366-447
Seg seg seg NA 7-18
100-113
574-583
superfamily SSF48452 TPR-like 2.7e-25 365-521
superfamily SSF54534 FKBP-like 8.9e-16 233-350
1-112
115-226
Wolf-PSORT
Lj0g3v0091679.1	pero 5, mito 4, cyto_pero 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0091679.1