Miyakogusa Predicted Gene
- Lj0g3v0091189.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
Q852R1_LOTJA |
586 |
99.6 |
99.6 |
(tr|Q852R1) Serine palmitoyltransferase OS=Lotus japonicus GN=LjLCB2 PE=2 SV=1 |
| TAIR_pep |
AT5G23670.2 |
501 |
83.2 |
90.3 |
| Symbols: LCB2 | long chain base2 | chr5:7981889-7985037 FORWARD LENGTH=489 |
| Medicago |
Medtr6g033290.1 |
572 |
96.1 |
98.6 |
| long chain base biosynthesis 2a-like protein | HC | chr6:10618345-10608414 | 20130731 |
| Soybean |
Glyma02g07250.1 |
561 |
93.9 |
97.8 |
|
| LJGI |
gnl|LJGI|TC62038 |
1657 |
100.0 |
100.0 |
UniRef100_Q852R1 Cluster: Serine palmitoyltransferase; n=1; Lotus japonicus|Rep: Serine palmitoyltransferase - Lotus japonicus, complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0091189.1 |
length: 282 aa. |
| IPR004839 |
Aminotransferase, class I/classII |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0009058 |
biosynthetic process |
|
|
| Molecular Function |
GO:0030170 |
pyridoxal phosphate binding |
|
|
| HMMPfam |
PF00155 |
Aminotran_1_2 |
2.7e-26 |
102-278 |
| IPR015421 |
Pyridoxal phosphate-dependent transferase, major region, subdomain 1 |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Molecular Function |
GO:0030170 |
pyridoxal phosphate binding |
|
|
| Gene3D |
G3DSA:3.40.640.10 |
no description |
8.5e-56 |
124-280 |
| IPR015424 |
Pyridoxal phosphate-dependent transferase |
| superfamily |
SSF53383 |
PLP-dependent |
3.5e-44 |
55-279 |
| no_ID |
|
| HMMPanther |
PTHR13693 |
CLASS |
1.5e-158 |
4-278 |
| HMMPanther |
PTHR13693:SF3 |
SERINE |
1.5e-158 |
4-278 |
- Wolf-PSORT
Lj0g3v0091189.1 extr 5, chlo 3, cyto 3, nucl 1, mito 1, E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0091189.1 |
|