Miyakogusa Predicted Gene

Lj0g3v0091139.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S326_LOTJA 320 82.8 82.8 (tr|I3S326) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G40950.1 202 71.2 78.1 | Symbols: RPL27 | ribosomal protein large subunit 27 | chr5:16410866-16411845 FORWARD LENGTH=198
Medicago Medtr3g020680.1 218 60.4 67.7 | 50S ribosomal protein L27 | HC | chr3:6000247-5996353 | 20130731
Soybean Glyma11g21150.1 265 70.1 75.8  
LJGI gnl|LJGI|TC60549 890 98.5 98.5 similar to UniRef100_A7P9V3 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (83%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0091139.1 length: 192 aa.
IPR001684 Ribosomal protein L27
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
BlastProDom PD003114 Q8LEF5_ARATH_Q8LEF5; 3e-15 84-124
FPrintScan PR00063 RIBOSOMALL27 3.7e-39 59-83
84-108
109-133
HAMAP MF_00539 Ribosomal_L27 27.316 56-139
HMMPanther PTHR15893 RIBOSOMAL 5.9e-48 41-180
HMMPfam PF01016 Ribosomal_L27 4.8e-37 57-137
HMMTigr TIGR00062 L27: 4.4e-37 56-136
superfamily SSF110324 Ribosomal 1.7e-23 75-140
IPR018261 Ribosomal protein L27, conserved site
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
PatternScan PS00831 RIBOSOMAL_L27 NA 89-103
no_ID  
Coil coil coiled-coil NA 156-177
Gene3D G3DSA:2.40.50.100 no description 7.6e-29 75-139
Seg seg seg NA 18-36
158-171
Wolf-PSORT
Lj0g3v0091139.1	chlo 11.5, chlo_mito 7, mito 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0091139.1