Miyakogusa Predicted Gene

Lj0g3v0091079.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J3V2_MEDTR 318 77.8 90.2 (tr|G7J3V2) F-box/LRR-repeat protein OS=Medicago truncatula GN=MTR_3g099090 PE=4 SV=1
TAIR_pep AT5G63520.1 165 46.6 62.1 | Symbols: | CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364), FIST C domain (InterPro:IPR019494), FIST domain, N-terminal (InterPro:IPR013702); Has 137 Blast hits to 137 proteins in 56 species: Archae - 0; Bacteria - 88; Metazoa - 6; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | chr5:25426300-25429093 REVERSE LENGTH=519
Medicago Medtr3g099090.2 319 77.8 90.2 | F-box/LRR plant protein | HC | chr3:45413956-45419675 | 20130731
Soybean Glyma06g17710.1 317 75.3 87.9  
LJGI gnl|LJGI|TC57473 1287 99.7 99.7 similar to UniRef100_A7PHI4 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0091079.1 length: 219 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 2.6e-06 34-71
HMMSmart SM00256 A 0.00024 34-74
superfamily SSF81383 F-box 2e-08 21-66
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 4e-06 31-66
Seg seg seg NA 5-15
Wolf-PSORT
Lj0g3v0091079.1	nucl 4, cyto 4, cyto_nucl 4, mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0091079.1