Miyakogusa Predicted Gene

Lj0g3v0091069.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N6J6_SOYBN 635 86.6 89.1 (tr|I1N6J6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G15930.1 549 80.7 88.6 | Symbols: PAM1 | plant adhesion molecule 1 | chr5:5200329-5202250 FORWARD LENGTH=356
Medicago Medtr6g016590.1 634 84.5 89.6 | RabGAP/TBC domain protein | HC | chr6:6292883-6289095 | 20130731
Soybean Glyma19g05360.1 635 86.6 89.1  
LJGI gnl|LJGI|TC77511 1023 99.8 99.8 similar to UniRef100_A7PAI7 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (44%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0091069.1 length: 366 aa.
IPR000195 Rab-GTPase-TBC domain
method AccNumber shortName E-value location
Molecular Function GO:0005097 Rab GTPase activator activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0032313 regulation of Rab GTPase activity    
HMMPfam PF00566 RabGAP-TBC 3.4e-56 90-296
HMMSmart SM00164 Domain 4e-69 83-300
ProfileScan PS50086 TBC_RABGAP 37.903 86-277
superfamily SSF47923 Ypt/Rab-GAP 7.5e-37 67-237
212-333
no_ID  
Coil coil coiled-coil NA 327-355
Gene3D G3DSA:1.10.8.270 no description 1.8e-34 79-198
HMMPanther PTHR22957 TBC1 2.5e-241 40-347
HMMPanther PTHR22957:SF126CG16896-PA T[40-347] 2.5e-241  
Seg seg seg NA 46-58
332-347
Wolf-PSORT
Lj0g3v0091069.1	nucl 7, cyto 3, chlo 1, extr 1, E.R. 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0091069.1