Miyakogusa Predicted Gene
- Lj0g3v0090429.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7L355_SOYBN |
167 |
61.0 |
74.3 |
(tr|K7L355) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G49290.1 |
68.6 |
31.0 |
48.3 |
| Symbols: ATRLP56, RLP56 | receptor like protein 56 | chr5:19980195-19983869 FORWARD LENGTH=908 |
| Medicago |
Medtr6g016200.1 |
195 |
66.2 |
79.4 |
| leucine-rich receptor-like kinase family protein | LC | chr6:5882213-5884406 | 20130731 |
| Soybean |
Glyma16g29220.1 |
120 |
42.2 |
63.7 |
|
| LJGI |
gnl|LJGI|TC76205 |
95.6 |
96.4 |
96.4 |
weakly similar to UniRef100_A7QGE7 Cluster: Chromosome undetermined scaffold_91, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_91, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0090429.1 |
length: 138 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.80.10.10 |
no description |
1.3e-05 |
2-50 |
| HMMPanther |
PTHR24420 |
FAMILY |
1.3e-16 |
1-110 |
| HMMPanther |
PTHR24420:SF473SUBFAMILY |
NOT |
1.3e-16 |
1-110 |
| superfamily |
SSF52058 |
L |
8.9e-08 |
2-54 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
81 |
103 |
- Wolf-PSORT
Lj0g3v0090429.1 chlo 4, mito 2, extr 2, E.R. 2, cyto 1, plas 1, vacu 1, cyto_mito 1, cysk_nucl 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0090429.1 |
|