Miyakogusa Predicted Gene

Lj0g3v0090229.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KQF6_SOYBN 674 76.7 82.7 (tr|K7KQF6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G25580.1 422 50.9 66.7 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:10888102-10889949 FORWARD LENGTH=615
Medicago Medtr5g042450.1 562 66.9 76.4 | PPR containing plant-like protein | HC | chr5:18668534-18660865 | 20130731
Soybean Glyma05g28780.1 673 76.5 82.5  
LJGI gnl|LJGI|TC65316 844 89.3 89.3 similar to UniRef100_A7P5P0 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0090229.1 length: 418 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.63 32-53
96-125
166-190
HMMPfam PF13812 PPR_3 0.0035 127-159
HMMTigr TIGR00756 PPR: 0.00047 97-125
128-161
ProfileScan PS51375 PPR 6.248 94-128
59-89
32-58
129-159
160-190
196-226
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00021 225-253
no_ID  
HMMPanther PTHR24015 FAMILY 7e-177 32-418
HMMPanther PTHR24015:SF0 SUBFAMILY 7e-177 32-418
HMMPfam PF14432 DYW_deaminase 4.1e-16 296-408
Seg seg seg NA 38-54
277-289
Wolf-PSORT
Lj0g3v0090229.1	nucl 6, cyto 5, chlo 1, mito 1, cysk 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0090229.1