Miyakogusa Predicted Gene

Lj0g3v0089839.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KVG3_SOYBN 1263 83.4 90.7 (tr|I1KVG3) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G15930.1 741 56.0 72.8 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:5387444-5389690 FORWARD LENGTH=687
Medicago Medtr3g052720.1 598 39.7 60.9 | organelle transcript processing protein, putative | HC | chr3:20868148-20864227 | 20130731
Soybean Glyma08g22830.1 1218 83.3 90.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0089839.1 length: 756 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.1 291-317
319-347
423-448
523-547
HMMPfam PF13041 PPR_2 2.2e-07 114-161
217-264
348-395
449-495
HMMTigr TIGR00756 PPR: 4.3e-05 118-151
218-251
319-349
350-384
424-448
452-484
486-521
ProfileScan PS51375 PPR 5.086 115-149
82-114
150-184
216-250
251-285
348-382
317-347
286-316
418-448
383-417
449-483
484-519
520-550
586-620
552-582
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.5e-09 549-607
no_ID  
HMMPanther PTHR24015 FAMILY 0 52-756
HMMPanther PTHR24015:SF78 SUBFAMILY 0 52-756
HMMPfam PF14432 DYW_deaminase 3.7e-17 629-746
Seg seg seg NA 7-26
231-246
superfamily SSF48452 TPR-like 2.7e-08 418-602
Wolf-PSORT
Lj0g3v0089839.1	chlo 12, nucl 1, mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0089839.1