Miyakogusa Predicted Gene
- Lj0g3v0089759.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
K7M0M5_SOYBN |
860 |
81.4 |
89.0 |
(tr|K7M0M5) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
TAIR_pep |
AT2G32940.1 |
634 |
62.6 |
74.5 |
| Symbols: AGO6 | Argonaute family protein | chr2:13972218-13976856 REVERSE LENGTH=878 |
Medicago |
Medtr3g083300.2 |
852 |
81.8 |
90.2 |
| eukaryotic translation initiation factor 2c, putative | HC | chr3:37597691-37589775 | 20130731 |
Soybean |
Glyma13g26240.1 |
860 |
81.4 |
89.0 |
|
LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0089759.1 |
length: 511 aa. |
IPR003100 |
Argonaute/Dicer protein, PAZ |
method |
AccNumber |
shortName |
E-value |
location |
Molecular Function |
GO:0005515 |
protein binding |
|
|
HMMPfam |
PF02170 |
PAZ |
2.8e-28 |
103-241 |
HMMSmart |
SM00949 |
no description |
0.0069 |
102-241 |
ProfileScan |
PS50821 |
PAZ |
12.881 |
126-219 |
superfamily |
SSF101690 |
PAZ |
3.6e-43 |
96-260 |
IPR003165 |
Stem cell self-renewal protein Piwi |
Molecular Function |
GO:0005515 |
protein binding |
|
|
HMMPfam |
PF02171 |
Piwi |
1.8e-27 |
388-509 |
ProfileScan |
PS50822 |
PIWI |
14.558 |
388-490 |
IPR012337 |
Ribonuclease H-like domain |
Molecular Function |
GO:0003676 |
nucleic acid binding |
|
|
superfamily |
SSF53098 |
Ribonuclease |
7.4e-24 |
235-511 |
IPR014811 |
Domain of unknown function DUF1785 |
HMMPfam |
PF08699 |
DUF1785 |
4.7e-13 |
50-101 |
no_ID |
|
Gene3D |
G3DSA:2.170.260.10 |
no description |
1.3e-27 |
100-225 |
Gene3D |
G3DSA:3.40.50.2300 |
no description |
1.5e-14 |
278-444 |
HMMPanther |
PTHR22891 |
EUKARYOTIC |
3.4e-155 |
2-511 |
HMMPanther |
PTHR22891:SF0 |
SUBFAMILY |
3.4e-155 |
2-511 |
- Wolf-PSORT
Lj0g3v0089759.1 chlo 5, cyto 4, nucl 2, extr 2, cyto_pero 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj0g3v0089759.1 |
|