Miyakogusa Predicted Gene

Lj0g3v0089689.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MUF8_SOYBN 678 68.5 74.2 (tr|I1MUF8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G18520.1 545 56.8 67.2 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 | chr3:6361605-6365367 FORWARD LENGTH=552
Medicago Medtr4g111985.2 683 67.2 73.4 | histone deacetylase superfamily protein | HC | chr4:46338588-46328537 | 20130731
Soybean Glyma17g13000.1 664 68.4 74.2  
LJGI gnl|LJGI|TC69063 2020 99.2 99.2 similar to UniRef100_A7PGP4 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (46%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0089689.1 length: 566 aa.
IPR000286 Histone deacetylase superfamily
method AccNumber shortName E-value location
FPrintScan PR01270 HDASUPER 7.7e-14 286-309
319-334
407-417
HMMPanther PTHR10625 HISTONE 7.4e-201 47-517
IPR023801 Histone deacetylase domain
Gene3D G3DSA:3.40.800.20 no description 2.9e-114 156-511
HMMPfam PF00850 Hist_deacetyl 4.2e-91 175-473
no_ID  
HMMPanther PTHR10625:SF22 HISTONE 7.4e-201 47-517
Seg seg seg NA 32-44
64-82
84-96
190-201
255-269
527-538
superfamily SSF52768 Arginase/deacetylase 8.1e-107 161-510
Wolf-PSORT
Lj0g3v0089689.1	mito 4.5, chlo_mito 4.5, nucl 4, chlo 3.5, cyto 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0089689.1