Miyakogusa Predicted Gene

Lj0g3v0089599.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LLQ0_SOYBN 521 91.6 96.0 (tr|I1LLQ0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G51770.2 456 77.7 92.3 | Symbols: ETO1 | tetratricopeptide repeat (TPR)-containing protein | chr3:19200328-19203998 REVERSE LENGTH=959
Medicago Medtr3g465430.1 517 90.4 97.1 | ethylene-overproduction protein | HC | chr3:26470454-26475179 | 20130731
Soybean Glyma11g29000.1 521 91.6 96.0  
LJGI gnl|LJGI|TC80479 573 100.0 100.0 similar to UniRef100_A7NYB1 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0089599.1 length: 314 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.7e-12 46-210
216-306
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 7.812 137-170
266-299
233-266
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 0.0044 63-96
137-170
266-299
ProfileScan PS50005 TPR 8.614 63-96
137-170
266-299
no_ID  
Coil coil coiled-coil NA 189-210
HMMPanther PTHR23083 TETRATRICOPEPTIDE 1.4e-144 41-310
HMMPanther PTHR23083:SF85 PREDICTED 1.4e-144 41-310
HMMPfam PF13414 TPR_11 3.3e-08 138-197
236-297
superfamily SSF81901 HCP-like 2.1e-16 66-300
Wolf-PSORT
Lj0g3v0089599.1	chlo 12, nucl 1, mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0089599.1