- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7K1P7_MEDTR |
107 |
28.3 |
47.5 |
(tr|G7K1P7) Replication factor A protein OS=Medicago truncatula GN=MTR_5g078250 PE=4 SV=1 |
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
Medtr5g078250.1 |
107 |
28.3 |
47.5 |
| replication factor-A carboxy-terminal domain protein | LC | chr5:33436158-33438920 | 20130731 |
| Soybean |
--No_Hits--
|
|
|
|
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0088619.1 |
length: 725 aa. |
| IPR012340 |
Nucleic acid-binding, OB-fold |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:2.40.50.140 |
no description |
5e-07 |
190-292 |
| superfamily |
SSF50249 |
Nucleic |
1.4e-16 |
154-310 |
| IPR013955 |
Replication factor A, C-terminal |
| HMMPfam |
PF08646 |
Rep_fac-A_C |
6.6e-09 |
179-291 |
- Wolf-PSORT
Lj0g3v0088619.1 chlo 8.5, chlo_mito 5, nucl 3, cyto 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0088619.1 |
|