Miyakogusa Predicted Gene

Lj0g3v0088499.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KIT0_SOYBN 573 83.7 92.2 (tr|I1KIT0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G18670.1 532 73.5 85.1 | Symbols: | Leucine-rich repeat (LRR) family protein | chr4:10275918-10278491 REVERSE LENGTH=857
Medicago Medtr6g086115.1 572 84.0 92.0 | LRR extensin-like protein | HC | chr6:32272379-32268377 | 20130731
Soybean Glyma07g09730.1 574 83.7 92.2  
LJGI gnl|LJGI|TC68119 846 99.8 99.8 similar to UniRef100_A7PES6 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0088499.1 length: 566 aa.
no_ID  
method AccNumber shortName E-value location
Coil coil coiled-coil NA 414-417
Gene3D G3DSA:3.80.10.10 no description 2.6e-71 84-386
HMMPanther PTHR24420 FAMILY 5.6e-193 11-361
HMMPanther PTHR24420:SF493PREDICTED PROTEIN 5.6e-193 11-361
HMMPfam PF13516 LRR_6 0.28 295-316
Seg seg seg NA 363-415
416-435
440-459
460-565
superfamily SSF52058 L 6.7e-57 79-391
Putative transmembrane regions
  From To
TM segments
SOSUI		 6 28
Wolf-PSORT
Lj0g3v0088499.1	vacu 4, pero 3, chlo 1, nucl 1, mito 1, plas 1, extr 1, E.R. 1, golg 1, chlo_mito 1, nucl_plas 1, golg_plas 1, E.R._plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0088499.1