Miyakogusa Predicted Gene
- Lj0g3v0088419.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1K4P5_SOYBN |
266 |
69.1 |
78.5 |
(tr|I1K4P5) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G10010.1 |
224 |
57.1 |
71.2 |
| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64910.1); Has 33260 Blast hits to 16857 proteins in 1270 species: Archae - 88; Bacteria - 3040; Metazoa - 11915; Fungi - 3137; Plants - 1371; Viruses - 424; Other Eukaryotes - 13285 (source: NCBI BLink). | chr5:3128098-3131452 FORWARD LENGTH=434 |
| Medicago |
--No_Hits--
|
|
|
|
|
| Soybean |
Glyma05g31690.1 |
266 |
69.1 |
78.5 |
|
| LJGI |
gnl|LJGI|TC66326 |
351 |
90.1 |
90.1 |
similar to UniRef100_A7PL25 Cluster: Chromosome chr7 scaffold_20, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_20, whole genome shotgun sequence - Vitis vinifera (Grape), partial (59%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0088419.2 |
length: 190 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Coil |
coil |
coiled-coil |
NA |
117-152 |
| Seg |
seg |
seg |
NA |
125-148 |
- Wolf-PSORT
Lj0g3v0088419.2 mito 6, chlo 2, nucl 2, extr 2, plas 1, pero 1, cyto_nucl 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0088419.2 |
|