Miyakogusa Predicted Gene

Lj0g3v0087829.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9SVG7_RICCO 920 76.2 84.9 (tr|B9SVG7) Nuclear matrix protein, putative OS=Ricinus communis GN=RCOM_1264550 PE=4 SV=1
TAIR_pep AT5G09860.1 833 70.3 81.2 | Symbols: AtTHO1, THO1, AtHPR1, HPR1 | nuclear matrix protein-related | chr5:3066815-3070733 FORWARD LENGTH=599
Medicago --No_Hits--        
Soybean Glyma04g16810.1 725 85.6 89.9  
LJGI gnl|LJGI|TC67260 1009 100.0 100.0 similar to UniRef100_A7QMC6 Cluster: Chromosome undetermined scaffold_125, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_125, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0087829.1 length: 573 aa.
IPR021861 THO complex, subunit THOC1
method AccNumber shortName E-value location
HMMPfam PF11957 efThoc1 1.3e-119 81-497
no_ID  
Coil coil coiled-coil NA 319-340
HMMPanther PTHR13265 THO 1.4e-171 4-545
HMMPanther PTHR13265:SF0 SUBFAMILY 1.4e-171 4-545
Seg seg seg NA 38-52
502-515
Wolf-PSORT
Lj0g3v0087829.1	cyto 9, nucl 2, chlo 1, plas 1, E.R. 1, cysk_nucl 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0087829.1