Miyakogusa Predicted Gene

Lj0g3v0087769.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7LEC3_MEDTR 1235 91.1 95.3 (tr|G7LEC3) Fimbrin OS=Medicago truncatula GN=MTR_8g011460 PE=4 SV=1
TAIR_pep AT5G48460.1 1078 78.9 88.7 | Symbols: | Actin binding Calponin homology (CH) domain-containing protein | chr5:19636225-19639365 REVERSE LENGTH=654
Medicago Medtr8g011460.1 1235 91.1 95.3 | actin-binding calponin-like (CH) domain protein | HC | chr8:3093695-3087650 | 20130731
Soybean Glyma08g45800.1 1228 89.3 93.7  
LJGI gnl|LJGI|TC76242 1170 99.7 99.7 similar to UniRef100_A7QYY5 Cluster: Chromosome undetermined scaffold_259, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome undetermined scaffold_259, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0087769.1 length: 665 aa.
IPR001589 Actinin-type, actin-binding, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0003779 actin binding    
PatternScan PS00019 ACTININ_1 NA 395-404
IPR001715 Calponin homology domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.10.418.10 no description 1.8e-29 119-230
231-366
376-495
509-618
HMMPfam PF00307 CH 4.2e-14 130-237
271-369
396-497
519-621
HMMSmart SM00033 Calponin 1.1e-19 125-238
270-369
395-497
516-620
ProfileScan PS50021 CH 15.295 123-240
268-371
393-499
514-622
superfamily SSF47576 Calponin-homology 8.1e-163 121-620
IPR011992 EF-hand-like domain
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 0.001 15-90
no_ID  
HMMPanther PTHR19961 FIMBRIN/PLASTIN 0 1-664
HMMPanther PTHR19961:SF9 FIMBRIN 0 1-664
Wolf-PSORT
Lj0g3v0087769.1	cyto 9, nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0087769.1