Miyakogusa Predicted Gene

Lj0g3v0087639.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S5U2_LOTJA 452 99.5 100.0 (tr|I3S5U2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G22140.2 402 84.8 89.7 | Symbols: EBS | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein | chr4:11728093-11730230 REVERSE LENGTH=224
Medicago Medtr2g078310.1 413 93.5 97.7 | PHD finger and bromo-adjacent-like domain protein | HC | chr2:32595275-32591772 | 20130731
Soybean Glyma13g34740.2 440 95.8 98.6  
LJGI gnl|LJGI|TC60689 1296 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0087639.1 length: 216 aa.
IPR001025 Bromo adjacent homology (BAH) domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
HMMPfam PF01426 BAH 3.3e-25 23-135
HMMSmart SM00439 Bromo 8.2e-42 21-136
ProfileScan PS51038 BAH 23.753 21-136
IPR001965 Zinc finger, PHD-type
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 PHD 1.7e-10 140-187
IPR011011 Zinc finger, FYVE/PHD-type
superfamily SSF57903 FYVE/PHD 6.1e-17 127-197
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 2.8e-17 137-194
IPR019786 Zinc finger, PHD-type, conserved site
PatternScan PS01359 ZF_PHD_1 NA 141-186
IPR019787 Zinc finger, PHD-finger
Molecular Function GO:0005515 protein binding    
HMMPfam PF00628 PHD 6.5e-11 140-188
ProfileScan PS50016 ZF_PHD_2 9.196 138-189
no_ID  
HMMPanther PTHR12505 PHD 2.4e-120 1-165
HMMPanther PTHR12505:SF7 TNC18_HUMAN 2.4e-120 1-165
Wolf-PSORT
Lj0g3v0087639.1	cyto 11, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0087639.1