Miyakogusa Predicted Gene

Lj0g3v0087609.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7ISK0_MEDTR 445 81.6 86.2 (tr|G7ISK0) Tubby-like F-box protein OS=Medicago truncatula GN=MTR_2g020280 PE=4 SV=1
TAIR_pep AT2G47900.3 360 65.1 79.7 | Symbols: TLP3 | tubby like protein 3 | chr2:19611196-19612766 REVERSE LENGTH=407
Medicago Medtr2g020280.1 445 81.6 86.2 | tubby-F-box-like protein | HC | chr2:6738683-6733208 | 20130731
Soybean Glyma15g10490.1 433 79.7 85.1  
LJGI gnl|LJGI|TC62542 1459 96.6 96.6 similar to UniRef100_Q8VY21 Cluster: Tubby-like F-box protein 3; n=1; Arabidopsis thaliana|Rep: Tubby-like F-box protein 3 - Arabidopsis thaliana (Mouse-ear cress), partial (85%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0087609.1 length: 283 aa.
IPR000007 Tubby, C-terminal
method AccNumber shortName E-value location
FPrintScan PR01573 SUPERTUBBY 1.5e-32 144-160
160-184
209-236
Gene3D G3DSA:3.20.90.10 no description 1.8e-42 88-257
HMMPfam PF01167 Tub 2.4e-54 93-252
IPR001810 F-box domain, cyclin-like
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 1.5e-08 28-81
IPR025659 Tubby C-terminal-like domain
superfamily SSF54518 Tubby 1.3e-50 77-259
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 2.5e-05 25-73
HMMPanther PTHR16517 TUBBY-RELATED 3.3e-124 1-251
HMMPanther PTHR16517:SF7 TUBBY 3.3e-124 1-251
Seg seg seg NA 8-20
109-120
262-274
Wolf-PSORT
Lj0g3v0087609.1	nucl 7, chlo 4, cyto_nucl 4, nucl_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0087609.1