Miyakogusa Predicted Gene

Lj0g3v0086419.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MNH9_SOYBN 753 67.5 77.1 (tr|K7MNH9) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT4G32980.1 302 53.7 70.3 | Symbols: ATH1 | homeobox gene 1 | chr4:15914865-15916873 REVERSE LENGTH=473
Medicago Medtr1g016490.1 622 62.5 73.2 | BEL1-like homeodomain protein | HC | chr1:4410107-4412872 | 20130731
Soybean Glyma06g05430.1 554 57.3 66.9  
LJGI gnl|LJGI|AV419283 58.0 86.2 86.2 homologue to UniRef100_Q8LLD9 Cluster: BEL1-related homeotic protein 29; n=1; Solanum tuberosum|Rep: BEL1-related homeotic protein 29 - Solanum tuberosum (Potato), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0086419.1 length: 542 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMSmart SM00389 Homeodomain 5.3e-06 443-507
ProfileScan PS50071 HOMEOBOX_2 11.208 440-503
IPR006563 POX
HMMPfam PF07526 POX 7.2e-20 271-399
HMMSmart SM00574 domain 2.1e-18 265-400
IPR008422 Homeobox KN domain
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF05920 Homeobox_KN 2.9e-14 460-499
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 2.2e-25 446-509
superfamily SSF46689 Homeodomain-like 1.7e-15 441-518
no_ID  
HMMPanther PTHR11850 HOMEOBOX 5.6e-69 340-537
HMMPanther PTHR11850:SF15 HOMEOBOX 5.6e-69 340-537
Seg seg seg NA 215-231
Wolf-PSORT
Lj0g3v0086419.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0086419.1