Miyakogusa Predicted Gene

Lj0g3v0085909.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S2B3_LOTJA 220 100.0 100.0 (tr|I3S2B3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G14455.1 149 55.4 73.8 | Symbols: ATBET12, BET12, ATBS14B, BS14B | Target SNARE coiled-coil domain protein | chr4:8310482-8311938 FORWARD LENGTH=130
Medicago Medtr1g044145.1 199 87.9 95.3 | Bet1-like SNARE protein 1-1 | HC | chr1:16563014-16568246 | 20130731
Soybean Glyma20g21860.1 195 86.9 91.6  
LJGI gnl|LJGI|TC65385 803 100.0 100.0 weakly similar to UniRef100_A7NXV2 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (61%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0085909.1 length: 133 aa.
IPR000727 Target SNARE coiled-coil domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF05739 SNARE 3.5e-12 41-101
ProfileScan PS50192 T_SNARE 12.771 35-97
no_ID  
Gene3D G3DSA:1.20.5.110 no description 1.1e-12 33-100
HMMPanther PTHR12791 GOLGI 7.7e-54 1-127
HMMPanther PTHR12791:SF5 BET1-LIKE 7.7e-54 1-127
Seg seg seg NA 8-26
Putative transmembrane regions
  From To
TM segments
SOSUI		 108 130
Wolf-PSORT
Lj0g3v0085909.1	chlo 3, mito 3, golg 3, chlo_mito 3, plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0085909.1