Miyakogusa Predicted Gene

Lj0g3v0085579.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SGW4_LOTJA 251 59.4 66.1 (tr|I3SGW4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G54520.1 133 39.3 51.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1517 (InterPro:IPR010903); Has 276 Blast hits to 275 proteins in 83 species: Archae - 0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | chr1:20363565-20365874 FORWARD LENGTH=391
Medicago Medtr3g063940.2 197 43.1 60.1 | transmembrane protein, putative | HC | chr3:28768782-28763981 | 20130731
Soybean Glyma11g31880.1 220 45.8 61.8  
LJGI gnl|LJGI|TC68409 1279 100.0 100.0 weakly similar to UniRef100_A7Q5W5 Cluster: Chromosome chr14 scaffold_54, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_54, whole genome shotgun sequence - Vitis vinifera (Grape), partial (43%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0085579.1 length: 349 aa.
IPR010903 Protein of unknown function DUF1517
method AccNumber shortName E-value location
HMMPfam PF07466 DUF1517 1.6e-23 28-244
227-337
no_ID  
ProfileScan PS51257 PROKAR_LIPOPROTEIN 5.000 1-21
Seg seg seg NA 8-29
30-61
227-232
297-309
Putative transmembrane regions
  From To
TM segments
SOSUI		 7 29
81 103
Wolf-PSORT
Lj0g3v0085579.1	plas 8, vacu 3, chlo 1, E.R. 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0085579.1