Miyakogusa Predicted Gene
- Lj0g3v0085329.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6TLK0_SOYBN |
127 |
93.5 |
96.8 |
(tr|C6TLK0) Putative uncharacterized protein OS=Glycine max PE=2 SV=1 |
| TAIR_pep |
AT5G06370.1 |
124 |
90.3 |
96.8 |
| Symbols: | NC domain-containing protein-related | chr5:1947299-1948432 REVERSE LENGTH=259 |
| Medicago |
Medtr1g057650.1 |
127 |
93.5 |
98.4 |
| lecithin retinol acyltransferase | HC | chr1:25342939-25339608 | 20130731 |
| Soybean |
Glyma02g35490.1 |
127 |
93.5 |
96.8 |
|
| LJGI |
gnl|LJGI|TC74013 |
369 |
100.0 |
100.0 |
similar to UniRef100_A7QHR8 Cluster: Chromosome chr8 scaffold_99, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_99, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0085329.1 |
length: 115 aa. |
| IPR000064 |
Endopeptidase, NLPC/P60 domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.90.1720.10 |
no description |
1.1e-05 |
6-53 |
| IPR007053 |
LRAT-like domain |
| HMMPfam |
PF04970 |
LRAT |
3.6e-12 |
10-58 |
| no_ID |
|
| HMMPanther |
PTHR13943 |
HRAS-LIKE |
4.6e-40 |
1-62 |
| HMMPanther |
PTHR13943:SF16 |
NC |
4.6e-40 |
1-62 |
| Seg |
seg |
seg |
NA |
89-103 |
- Wolf-PSORT
Lj0g3v0085329.1 nucl 9.5, cyto_nucl 6, cyto 1.5, chlo 1, mito 1, chlo_mito 1, golg_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0085329.1 |
|