Miyakogusa Predicted Gene

Lj0g3v0084789.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LIB2_SOYBN 1078 74.2 83.4 (tr|K7LIB2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G49740.1 735 49.1 68.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:18447788-18450001 FORWARD LENGTH=737
Medicago Medtr1g052100.1 1079 72.2 82.7 | PPR containing plant-like protein | HC | chr1:20983048-20985397 | 20130731
Soybean Glyma10g12340.1 1002 72.6 82.3  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0084789.1 length: 737 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.12 127-154
231-254
335-358
428-449
530-555
632-653
698-725
HMMPfam PF13041 PPR_2 1.4e-12 157-204
260-307
358-402
556-604
HMMTigr TIGR00756 PPR: 2.6e-06 127-155
262-294
360-394
428-449
558-592
ProfileScan PS51375 PPR 8.670 157-192
125-155
227-257
260-294
358-392
327-357
424-458
490-524
556-591
525-555
592-627
694-728
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 9e-07 667-715
no_ID  
HMMPanther PTHR24015 FAMILY 4.1e-203 5-735
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 4.1e-203 5-735
Seg seg seg NA 493-508
Wolf-PSORT
Lj0g3v0084789.1	chlo 12, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0084789.1