Miyakogusa Predicted Gene

Lj0g3v0084739.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1KL35_SOYBN 680 71.0 78.3 (tr|I1KL35) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT2G15860.1 497 58.4 70.7 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr2:6905712-6909282 REVERSE LENGTH=512

Medicago Medtr1g034170.1 662 72.7 78.7 | hypothetical protein | HC | chr1:12396173-12390213 | 20130731

Soybean Glyma07g29660.1 680 71.0 78.3

LJGI gnl|LJGI|FS344425 1219 99.7 99.7 similar to UniRef100_A7P9B2 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0084739.1 length: 505 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 30-38
80-109
322-331
391-403

Wolf-PSORT

Lj0g3v0084739.1 nucl 11.5, nucl_plas 6.5, cyto 1, mito 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0084739.1 Not targeted -38.886 -6.577 -7.204 50.77% -25.106

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1KL35_SOYBN	680	71.0	78.3	(tr\|I1KL35) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT2G15860.1	497	58.4	70.7	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). \| chr2:6905712-6909282 REVERSE LENGTH=512
Medicago	Medtr1g034170.1	662	72.7	78.7	\| hypothetical protein \| HC \| chr1:12396173-12390213 \| 20130731
Soybean	Glyma07g29660.1	680	71.0	78.3
LJGI	gnl\|LJGI\|FS344425	1219	99.7	99.7	similar to UniRef100_A7P9B2 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)

no_ID
Lj0g3v0084739.1				length: 505 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	30-38 80-109 322-331 391-403