Miyakogusa Predicted Gene

Lj0g3v0084729.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LW70_SOYBN 424 78.4 86.8 (tr|I1LW70) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G08320.2 269 53.7 67.8 | Symbols: TPR8 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:5252853-5254990 FORWARD LENGTH=427
Medicago Medtr1g030300.1 407 76.0 84.1 | small glutamine-rich TPR containing protein, putative | HC | chr1:10531288-10522947 | 20130731
Soybean Glyma13g03270.1 424 78.4 86.8  
LJGI gnl|LJGI|TC62745 1564 99.5 99.5 similar to UniRef100_Q84VX9 Cluster: At4g08320; n=1; Arabidopsis thaliana|Rep: At4g08320 - Arabidopsis thaliana (Mouse-ear cress), partial (43%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0084729.1 length: 270 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3.4e-23 187-269
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 17.817 189-270
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 1.2e-06 189-222
223-256
ProfileScan PS50005 TPR 8.939 189-222
223-256
no_ID  
HMMPanther PTHR22904 TPR 1.4e-47 148-270
HMMPanther PTHR22904:SF11 SMALL 1.4e-47 148-270
HMMPfam PF13414 TPR_11 3e-16 188-254
superfamily SSF48452 TPR-like 1.4e-22 187-269
Wolf-PSORT
Lj0g3v0084729.1	nucl 5.5, cyto_nucl 4.5, mito 4, cyto 2.5, chlo 2, cyto_mito 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0084729.1