Miyakogusa Predicted Gene
- Lj0g3v0084509.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
A5AHQ5_VITVI |
250 |
38.9 |
58.1 |
(tr|A5AHQ5) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026047 PE=4 SV=1 |
| TAIR_pep |
AT4G38180.1 |
169 |
29.2 |
49.4 |
| Symbols: FRS5 | FAR1-related sequence 5 | chr4:17906702-17909404 REVERSE LENGTH=788 |
| Medicago |
Medtr6g022070.1 |
77.8 |
27.8 |
47.7 |
| hypothetical protein | LC | chr6:7671087-7669835 | 20130731 |
| Soybean |
Glyma14g31610.1 |
175 |
31.8 |
52.6 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0084509.1 |
length: 392 aa. |
| IPR006564 |
Zinc finger, PMZ-type |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| HMMSmart |
SM00575 |
plant |
4.1e-06 |
283-310 |
| IPR007527 |
Zinc finger, SWIM-type |
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| ProfileScan |
PS50966 |
ZF_SWIM |
10.299 |
272-308 |
| IPR018289 |
MULE transposase domain |
| HMMPfam |
PF10551 |
MULE |
3.5e-23 |
11-90 |
| no_ID |
|
| HMMPanther |
PTHR31669 |
FAMILY |
5.9e-71 |
4-352 |
| HMMPanther |
PTHR31669:SF0 |
SUBFAMILY |
5.9e-71 |
4-352 |
- Wolf-PSORT
Lj0g3v0084509.1 chlo 4, nucl 3, mito 2.5, nucl_plas 2.5, plas 2, cyto_nucl 2, cyto_mito 2, cysk_nucl 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0084509.1 |
|