Miyakogusa Predicted Gene
- Lj0g3v0083439.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1J7S3_SOYBN |
344 |
90.6 |
93.9 |
(tr|I1J7S3) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G60660.1 |
266 |
68.9 |
80.3 |
| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1395 (InterPro:IPR009829); Has 131 Blast hits to 131 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 83; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr3:22421481-22423167 FORWARD LENGTH=272 |
| Medicago |
Medtr4g026180.1 |
311 |
84.8 |
87.6 |
| spindle and kinetochore-associated-like protein | HC | chr4:9020682-9015814 | 20130731 |
| Soybean |
Glyma01g33340.1 |
344 |
90.6 |
93.9 |
|
| LJGI |
gnl|LJGI|TC71078 |
609 |
99.7 |
99.7 |
similar to UniRef100_A7PYB5 Cluster: Chromosome chr15 scaffold_37, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_37, whole genome shotgun sequence - Vitis vinifera (Grape), partial (68%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0083439.2 |
length: 181 aa. |
| IPR009829 |
Protein of unknown function DUF1395 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF07160 |
DUF1395 |
2.2e-58 |
1-173 |
- Wolf-PSORT
Lj0g3v0083439.2 cyto 8.5, cyto_E.R. 5, chlo 1, nucl 1, plas 1, extr 1, cysk 1, cysk_nucl 1, nucl_plas 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0083439.2 |
|