Miyakogusa Predicted Gene

Lj0g3v0082219.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7ME72_SOYBN 557 75.9 84.9 (tr|K7ME72) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G18520.1 214 34.0 51.7 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:10215250-10217103 REVERSE LENGTH=617
Medicago Medtr1g111020.2 540 73.0 81.5 | pentatricopeptide (PPR) repeat protein | HC | chr1:50134416-50129873 | 20130731
Soybean Glyma15g42850.1 405 73.9 82.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0082219.1 length: 420 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.042 289-313
394-419
HMMPfam PF13041 PPR_2 6.5e-11 116-161
215-263
316-364
HMMTigr TIGR00756 PPR: 2.8e-05 117-151
218-252
319-353
ProfileScan PS51375 PPR 5.207 48-82
115-149
83-113
150-184
216-250
185-215
317-351
286-316
387-420
352-386
no_ID  
HMMPanther PTHR24015 FAMILY 1e-104 33-420
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 1e-104 33-420
Seg seg seg NA 270-285
Wolf-PSORT
Lj0g3v0082219.1	chlo 12, mito 1.5, cyto_mito 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0082219.1