Miyakogusa Predicted Gene

Lj0g3v0082119.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JJI8_SOYBN 327 74.3 86.4 (tr|I1JJI8) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT5G55590.1 255 55.4 73.2 | Symbols: QRT1 | Pectin lyase-like superfamily protein | chr5:22519911-22521699 FORWARD LENGTH=380
Medicago Medtr5g095490.1 315 75.1 84.3 | pectinesterase | HC | chr5:41736379-41738796 | 20130731
Soybean Glyma02g46890.1 327 74.3 86.4  
LJGI gnl|LJGI|TC76166 801 95.5 95.5  
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0082119.1 length: 233 aa.
IPR000070 Pectinesterase, catalytic
method AccNumber shortName E-value location
Cellular Component GO:0005618 cell wall    
Molecular Function GO:0030599 pectinesterase activity    
Biological Process GO:0042545 cell wall modification    
HMMPfam PF01095 Pectinesterase 4.3e-39 59-228
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 5.1e-42 51-230
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 8e-58 57-230
no_ID  
HMMPanther PTHR31321 FAMILY 1.5e-73 57-230
HMMPanther PTHR31321:SF0 SUBFAMILY 1.5e-73 57-230
Seg seg seg NA 3-13
Putative transmembrane regions
  From To
TM segments
SOSUI		 2 24
Wolf-PSORT
Lj0g3v0082119.1	vacu 7, E.R. 4, cyto 1, extr 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0082119.1