Miyakogusa Predicted Gene

Lj0g3v0082089.2

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1L785_SOYBN 634 78.5 86.7 (tr|I1L785) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G23200.1 509 60.4 75.7 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:7807319-7808988 FORWARD LENGTH=399

Medicago Medtr1g037570.1 673 78.8 88.8 | hypothetical protein | HC | chr1:13905344-13908404 | 20130731

Soybean Glyma09g41950.1 634 78.5 86.7

LJGI gnl|LJGI|TC70732 769 100.0 100.0 similar to UniRef100_A7Q7L7 Cluster: Chromosome undetermined scaffold_60, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_60, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0082089.2 length: 398 aa.

no_ID

method AccNumber shortName E-value location

Gene3D G3DSA:2.170.270.10 no description 3.9e-17 354-374

Wolf-PSORT

Lj0g3v0082089.2 nucl 7, chlo 3, cyto 3

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0082089.2

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1L785_SOYBN	634	78.5	86.7	(tr\|I1L785) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G23200.1	509	60.4	75.7	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). \| chr5:7807319-7808988 FORWARD LENGTH=399
Medicago	Medtr1g037570.1	673	78.8	88.8	\| hypothetical protein \| HC \| chr1:13905344-13908404 \| 20130731
Soybean	Glyma09g41950.1	634	78.5	86.7
LJGI	gnl\|LJGI\|TC70732	769	100.0	100.0	similar to UniRef100_A7Q7L7 Cluster: Chromosome undetermined scaffold_60, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome undetermined scaffold_60, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)

no_ID
Lj0g3v0082089.2				length: 398 aa.
method	AccNumber	shortName	E-value	location
Gene3D	G3DSA:2.170.270.10	no description	3.9e-17	354-374