Miyakogusa Predicted Gene
- Lj0g3v0081769.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7M050_SOYBN |
247 |
63.8 |
77.9 |
(tr|K7M050) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G20260.1 |
151 |
47.4 |
71.1 |
| Symbols: | Exostosin family protein | chr5:6836806-6839532 REVERSE LENGTH=458 |
| Medicago |
Medtr4g115540.2 |
269 |
71.2 |
85.3 |
| glycosyltransferase | HC | chr4:47731269-47727392 | 20130731 |
| Soybean |
Glyma17g11860.1 |
208 |
63.5 |
79.9 |
|
| LJGI |
gnl|LJGI|GO025815 |
81.8 |
80.0 |
80.0 |
similar to UniRef100_A4Q7M7 Cluster: Exostosin-like; n=1; Medicago truncatula|Rep: Exostosin-like - Medicago truncatula (Barrel medic), partial (16%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0081769.1 |
length: 229 aa. |
| IPR004263 |
Exostosin-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPfam |
PF03016 |
Exostosin |
2.5e-06 |
132-204 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
12-29 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
8 |
30 |
- Wolf-PSORT
Lj0g3v0081769.1 chlo 4, vacu 4, nucl 2, chlo_mito 2, cyto 1, plas 1, extr 1, E.R. 1, cysk_nucl 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0081769.1 |
|