Miyakogusa Predicted Gene
- Lj0g3v0080979.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MWJ4_SOYBN |
168 |
53.4 |
68.2 |
(tr|K7MWJ4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G38690.1 |
88.6 |
32.2 |
55.9 |
| Symbols: | Zinc-finger domain of monoamine-oxidase A repressor R1 protein | chr5:15479424-15482992 REVERSE LENGTH=572 |
| Medicago |
Medtr6g017265.1 |
148 |
49.4 |
65.3 |
| zinc-finger of monoamine-oxidase A repressor R1 | HC | chr6:6917300-6911610 | 20130731 |
| Soybean |
Glyma19g06110.1 |
168 |
53.4 |
68.2 |
|
| LJGI |
gnl|LJGI|BP075118 |
531 |
97.7 |
97.7 |
similar to UniRef100_A7PAL1 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0080979.2 |
length: 205 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Coil |
coil |
coiled-coil |
NA |
114-135 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
188 |
204 |
- Wolf-PSORT
Lj0g3v0080979.2 cyto 6, chlo 2, golg 2, nucl 1, plas 1, vacu 1, E.R. 1, chlo_mito 1, nucl_plas 1, E.R._vacu 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0080979.2 |
|