Miyakogusa Predicted Gene
- Lj0g3v0080209.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
O81120_LOTJA |
533 |
76.7 |
86.4 |
(tr|O81120) Nodule-specific protein Nlj70 OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT2G39210.1 |
353 |
49.0 |
69.2 |
| Symbols: | Major facilitator superfamily protein | chr2:16366287-16368231 REVERSE LENGTH=601 |
| Medicago |
Medtr1g050550.1 |
444 |
64.2 |
78.0 |
| MFS transporter | HC | chr1:19714149-19712167 | 20130731 |
| Soybean |
Glyma16g27460.1 |
478 |
69.3 |
81.0 |
|
| LJGI |
gnl|LJGI|TC60446 |
741 |
85.3 |
85.3 |
UniRef100_O81120 Cluster: Nodule-specific protein Nlj70; n=1; Lotus japonicus|Rep: Nodule-specific protein Nlj70 - Lotus japonicus, complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0080209.1 |
length: 361 aa. |
| IPR010658 |
Nodulin-like |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF06813 |
Nodulin-like |
4.8e-89 |
26-271 |
| IPR016196 |
Major facilitator superfamily domain, general substrate transporter |
| superfamily |
SSF103473 |
MFS |
1e-07 |
26-259 |
| no_ID |
|
| HMMPanther |
PTHR21576 |
UNCHARACTERIZED |
2.1e-128 |
21-352 |
| HMMPanther |
PTHR21576:SF8 |
SUBFAMILY |
2.1e-128 |
21-352 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
28 |
50 |
| 92 |
113 |
| 124 |
146 |
| 154 |
176 |
| 185 |
207 |
| 222 |
244 |
| 253 |
274 |
- Wolf-PSORT
Lj0g3v0080209.1 chlo 4, nucl 3, plas 3, nucl_plas 3, mito 2.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0080209.1 |
|