Miyakogusa Predicted Gene

Lj0g3v0079829.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LEI6_SOYBN 236 64.5 77.5 (tr|K7LEI6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G12300.1 135 40.1 67.3 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:4184163-4186076 REVERSE LENGTH=637
Medicago Medtr0051s0110.1 216 61.9 78.4 | pentatricopeptide (PPR) repeat protein | LC | scaffold0051:51916-50064 | 20130731
Soybean Glyma09g30530.1 226 69.6 84.5  
LJGI gnl|LJGI|FS333759 172 81.7 81.7 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14 scaffold_54, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_54, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0079829.1 length: 180 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF12854 PPR_1 9.8e-08 150-180
HMMPfam PF13041 PPR_2 2.3e-16 84-132
HMMTigr TIGR00756 PPR: 0.00015 87-121
122-155
157-179
ProfileScan PS51375 PPR 8.977 85-119
50-84
120-154
155-180
no_ID  
HMMPanther PTHR24015 FAMILY 1.6e-35 24-180
HMMPanther PTHR24015:SF0 SUBFAMILY 1.6e-35 24-180
Wolf-PSORT
Lj0g3v0079829.1	chlo 8, mito 4.5, cyto_mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0079829.1