Miyakogusa Predicted Gene

Lj0g3v0079559.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N0N9_SOYBN 443 43.6 60.6 (tr|K7N0N9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G39710.1 404 38.3 56.5 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:15895729-15897972 FORWARD LENGTH=747
Medicago Medtr1g033960.1 452 40.9 55.8 | PPR containing plant-like protein | HC | chr1:12282466-12279095 | 20130731
Soybean Glyma20g01300.1 323 33.6 47.1  
LJGI gnl|LJGI|FS328368 1263 97.1 97.1 weakly similar to UniRef100_Q9FIX3 Cluster: Gb|AAD30619.1; n=1; Arabidopsis thaliana|Rep: Gb|AAD30619.1 - Arabidopsis thaliana, partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0079559.1 length: 710 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0081 343-368
588-617
HMMPfam PF12854 PPR_1 2.1e-08 90-121
227-259
HMMPfam PF13041 PPR_2 2.7e-07 125-174
265-313
378-427
464-510
HMMTigr TIGR00756 PPR: 0.0015 97-121
128-162
163-195
200-231
233-267
268-302
304-335
343-371
381-414
416-445
468-495
588-617
ProfileScan PS51375 PPR 5.360 94-124
59-93
126-160
161-196
197-230
231-265
266-300
301-335
336-370
379-413
414-448
464-498
585-619
550-584
620-650
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.2e-05 464-493
no_ID  
Coil coil coiled-coil NA 136-157
HMMPanther PTHR24015 FAMILY 1.4e-113 50-649
HMMPanther PTHR24015:SF0 SUBFAMILY 1.4e-113 50-649
Wolf-PSORT
Lj0g3v0079559.1	mito 6.5, chlo 6, cyto_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0079559.1