Miyakogusa Predicted Gene

Lj0g3v0079039.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S4X3_LOTJA 748 89.1 89.8 (tr|I3S4X3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G29150.1 657 78.8 85.3 | Symbols: ATS9, RPN6 | non-ATPase subunit 9 | chr1:10181240-10182499 FORWARD LENGTH=419
Medicago Medtr3g109300.1 723 85.0 88.6 | 26S proteasome non-ATPase regulatory subunit-like protein | LC | chr3:50533714-50540516 | 20130731
Soybean Glyma04g08280.1 721 85.7 88.1  
LJGI gnl|LJGI|TC60588 1822 93.2 93.2  
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0079039.1 length: 423 aa.
IPR000717 Proteasome component (PCI) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF01399 PCI 1e-19 286-387
HMMSmart SM00088 motif 1.8e-18 321-404
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00019 109-256
IPR011991 Winged helix-turn-helix DNA-binding domain
Gene3D G3DSA:1.10.10.10 no description 1.6e-23 316-397
IPR013143 PCI/PINT associated module
HMMSmart SM00753 PCI/PINT 3.8e-62 144-320
no_ID  
HMMPanther PTHR10678 26S 4.9e-226 15-423
HMMPanther PTHR10678:SF2 26S 4.9e-226 15-423
Seg seg seg NA 157-177
183-200
superfamily SSF46785 "Winged 1.4e-22 315-398
Wolf-PSORT
Lj0g3v0079039.1	chlo 6, plas 3.5, nucl_plas 3, cyto 2, nucl 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0079039.1