Miyakogusa Predicted Gene
- Lj0g3v0078989.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1K484_SOYBN |
428 |
83.5 |
85.9 |
(tr|I1K484) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G55350.5 |
392 |
74.0 |
81.4 |
| Symbols: DEK1 | calpain-type cysteine protease family | chr1:20654463-20664501 REVERSE LENGTH=2179 |
| Medicago |
Medtr8g088520.1 |
430 |
82.6 |
86.9 |
| calpain family cysteine protease | HC | chr8:36702342-36724494 | 20130731 |
| Soybean |
Glyma05g30080.2 |
428 |
83.5 |
85.9 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0078989.1 |
length: 261 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
129-150 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
11 |
33 |
| 64 |
86 |
| 99 |
120 |
| 130 |
152 |
| 167 |
189 |
| 236 |
258 |
- Wolf-PSORT
Lj0g3v0078989.1 vacu 5, plas 3, cyto 2, E.R. 2, nucl_plas 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0078989.1 |
|