Miyakogusa Predicted Gene
- Lj0g3v0078599.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B7FJ06_MEDTR |
265 |
86.1 |
95.1 |
(tr|B7FJ06) Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1 |
| TAIR_pep |
AT1G44800.1 |
221 |
71.4 |
86.4 |
| Symbols: | nodulin MtN21 /EamA-like transporter family protein | chr1:16914342-16916858 REVERSE LENGTH=370 |
| Medicago |
Medtr1g030580.1 |
265 |
86.1 |
95.1 |
| nodulin MtN21/EamA-like transporter family protein | HC | chr1:10605525-10599616 | 20130731 |
| Soybean |
Glyma14g23300.1 |
264 |
83.9 |
91.9 |
|
| LJGI |
gnl|LJGI|TC57546 |
1072 |
100.0 |
100.0 |
similar to UniRef100_A7NVB4 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (77%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0078599.1 |
length: 218 aa. |
| IPR000620 |
Drug/metabolite transporter |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPfam |
PF00892 |
EamA |
2.6e-14 |
95-216 |
| no_ID |
|
| HMMPanther |
PTHR31218 |
FAMILY |
6.5e-63 |
72-218 |
| superfamily |
SSF103481 |
Multidrug |
2.7e-08 |
117-218 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
1 |
20 |
| 35 |
57 |
| 83 |
105 |
| 111 |
133 |
| 140 |
162 |
| 176 |
198 |
- Wolf-PSORT
Lj0g3v0078599.1 cyto 6, chlo 2, extr 2, nucl 1, plas 1, E.R. 1, golg 1, chlo_mito 1, nucl_plas 1, golg_plas 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0078599.1 |
|