Miyakogusa Predicted Gene

Lj0g3v0078449.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7K5T4_SOYBN 892 72.6 77.7 (tr|K7K5T4) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT4G01660.1 706 75.0 86.7 | Symbols: ATABC1, ATATH10, ABC1 | ABC transporter 1 | chr4:708652-711095 FORWARD LENGTH=623

Medicago Medtr1g085610.1 876 72.5 78.0 | ubiquinone biosynthesis protein | HC | chr1:38246078-38254179 | 20130731

Soybean Glyma02g00920.1 832 78.5 83.4

LJGI gnl|LJGI|TC75893 1185 99.8 99.8 similar to UniRef100_A7Q0X5 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (31%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0078449.1 length: 606 aa.

IPR004147 UbiB domain

method AccNumber shortName E-value location

HMMPfam PF03109 ABC1 7.1e-34 266-380

IPR011009 Protein kinase-like domain

Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups

superfamily SSF56112 Protein 3.3e-09 254-473

no_ID

HMMPanther PTHR10566 CHAPERONE-ACTIVITY 1.1e-173 150-586

HMMPanther PTHR10566:SF22 UNCHARACTERIZED 1.1e-173 150-586

Seg seg seg NA 56-85
86-95
129-153
162-173

Wolf-PSORT

Lj0g3v0078449.1 chlo 12, cyto 1, pero 1, cyto_pero 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0078449.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7K5T4_SOYBN	892	72.6	77.7	(tr\|K7K5T4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT4G01660.1	706	75.0	86.7	\| Symbols: ATABC1, ATATH10, ABC1 \| ABC transporter 1 \| chr4:708652-711095 FORWARD LENGTH=623
Medicago	Medtr1g085610.1	876	72.5	78.0	\| ubiquinone biosynthesis protein \| HC \| chr1:38246078-38254179 \| 20130731
Soybean	Glyma02g00920.1	832	78.5	83.4
LJGI	gnl\|LJGI\|TC75893	1185	99.8	99.8	similar to UniRef100_A7Q0X5 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (31%)

IPR004147	UbiB domain
Lj0g3v0078449.1				length: 606 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF03109	ABC1	7.1e-34	266-380
IPR011009	Protein kinase-like domain
Molecular Function	GO:0016772	transferase activity, transferring phosphorus-containing groups
superfamily	SSF56112	Protein	3.3e-09	254-473
no_ID
HMMPanther	PTHR10566	CHAPERONE-ACTIVITY	1.1e-173	150-586
HMMPanther	PTHR10566:SF22	UNCHARACTERIZED	1.1e-173	150-586
Seg	seg	seg	NA	56-85 86-95 129-153 162-173