Miyakogusa Predicted Gene

Lj0g3v0078389.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L6X7_SOYBN 558 63.5 73.3 (tr|K7L6X7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G17450.1 231 31.3 49.9 | Symbols: | hAT dimerisation domain-containing protein | chr3:5972793-5975684 REVERSE LENGTH=877
Medicago Medtr4g122510.1 53.5 43.1 62.1 | hypothetical protein | LC | chr4:50514720-50515043 | 20130731
Soybean Glyma08g16350.1 534 67.2 77.7  
LJGI gnl|LJGI|BP083809 165 98.9 98.9 similar to UniRef100_A7Q5G9 Cluster: Chromosome undetermined scaffold_53, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_53, whole genome shotgun sequence - Vitis vinifera (Grape), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0078389.1 length: 514 aa.
IPR003656 Zinc finger, BED-type predicted
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
HMMPfam PF02892 zf-BED 4.4e-09 17-61
ProfileScan PS50808 ZF_BED 9.237 14-71
IPR007021 Domain of unknown function DUF659
HMMPfam PF04937 DUF659 4.1e-60 210-358
IPR012337 Ribonuclease H-like domain
Molecular Function GO:0003676 nucleic acid binding    
superfamily SSF53098 Ribonuclease 1.5e-28 231-455
no_ID  
HMMPanther PTHR32166 FAMILY 9.9e-116 13-445
HMMPanther PTHR32166:SF0 SUBFAMILY 9.9e-116 13-445
Seg seg seg NA 397-410
447-475
Putative transmembrane regions
  From To
TM segments
SOSUI		 448 470
Wolf-PSORT
Lj0g3v0078389.1	nucl 6, cyto 4, vacu 2, cyto_pero 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0078389.1