Miyakogusa Predicted Gene
- Lj0g3v0078349.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T6Q5_LOTJA |
80.1 |
75.0 |
75.0 |
(tr|I3T6Q5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G33490.1 |
51.6 |
64.7 |
85.3 |
| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2062 (InterPro:IPR018639); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10140.1); Has 88 Blast hits to 88 proteins in 29 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr1:12150941-12152276 REVERSE LENGTH=175 |
| Medicago |
Medtr3g006190.1 |
57.8 |
58.2 |
63.6 |
| cytoplasmic membrane protein | HC | chr3:585927-581249 | 20130731 |
| Soybean |
Glyma06g48220.1 |
68.6 |
66.1 |
69.6 |
|
| LJGI |
gnl|LJGI|BP052522 |
353 |
97.0 |
97.0 |
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0078349.1 |
length: 66 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
45-57 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
9 |
31 |
- Wolf-PSORT
Lj0g3v0078349.1 chlo 4, extr 3, nucl 2, cyto 2, cyto_nucl 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0078349.1 |
|